Liste des publications

2024

• Hi-M: A Multiplex Oligopaint FISH Method to Capture Chromatin Conformations In Situ and Accompanying Open-Source Acquisition Software

  Fiche JB, Schaeffer M, Houbron C, Elkhoury Youhanna C, Messina O, Barho F, Nollmann M, Methods Mol Biol, 2024

• pyHiM: a new open-source, multi-platform software package for spatial genomics based on multiplexed DNA-FISH imaging

  Devos X, Fiche JB, Bardou M, Messina O, Houbron C, Gurgo J, Schaeffer M, Goetz M, Walter T, Mueller F, Nollmann M, Genome Biol, 2024

2023

• 3D chromatin interactions involving Drosophila insulators are infrequent but preferential and arise before TADs and transcription

  Messina O, Raynal F, Gurgo J, Fiche JB, Pancaldi V, Nollmann M, Nat Commun, 2023

2022

• Multiple parameters shape the 3D chromatin structure of single nuclei at the doc locus in Drosophila

  Goetz M, Messina O, Espinola S, Fiche JB, Nollmann M, Nat Commun, 2022

• Multiple parameters shape the 3D chromatin structure of single nuclei at the doc locus in Drosophila

  Gotz M, Messina O, Espinola S, Fiche JB, Nollmann M, Nat Commun, 2022

2021

• Cis-regulatory chromatin loops arise before TADs and gene activation, and are independent of cell fate during early Drosophila development

  Espinola SM, Gotz M, Bellec M, Messina O, Fiche JB, Houbron C, Dejean M, Reim I, Cardozo Gizzi AM, Lagha M, Nollmann M, Nat Genet, 2021

2019

• Microscopy-Based Chromosome Conformation Capture Enables Simultaneous Visualization of Genome Organization and Transcription in Intact Organisms

  Cardozo Gizzi AM, Cattoni DI, Fiche JB, Espinola SM, Gurgo J, Messina O, Houbron C, Ogiyama Y, Papadopoulos GL, Cavalli G, Lagha M, Nollmann M, Mol Cell, 2019