Liste des publications

2022

• Evaluating and mitigating clinical samples matrix effects on TX-TL cell-free performance

  Voyvodic PL, Conejero I, Mesmoudi K, Renard E, Courtet P, Cattoni DI, Bonnet J, Sci Rep, 2022

2020

• Direct and simultaneous observation of transcription and chromosome architecture in single cells with Hi-M

  Cardozo Gizzi AM, Espinola SM, Gurgo J, Houbron C, Fiche JB, Cattoni DI, Nollmann M, Nat Protoc, 2020

• TADs or no TADS: lessons from single-cell imaging visualization of chromosome architecture

  Cardozo Gizzi AM, Cattoni DI, Nollmann M, J Mol Biol, 2020

2019

• Microscopy-Based Chromosome Conformation Capture Enables Simultaneous Visualization of Genome Organization and Transcription in Intact Organisms

  Cardozo Gizzi AM, Cattoni DI, Fiche JB, Espinola SM, Gurgo J, Messina O, Houbron C, Ogiyama Y, Papadopoulos GL, Cavalli G, Lagha M, Nollmann M, Mol Cell, 2019

2018

• Sequence-dependent catalytic regulation of the SpoIIIE motor activity ensures directionality of DNA translocation

  Chara O, Borges A, Milhiet PE, Nollmann M, Cattoni DI, Sci Rep, 2018

• TADs are 3D structural units of higher-order chromosome organization in

  Szabo Q, Jost D, Chang JM, Cattoni DI, Papadopoulos GL, Bonev B, Sexton T, Gurgo J, Jacquier C, Nollmann M, Bantignies F, Cavalli G, Sci Adv, 2018

• DNA Organization and Superesolved Segregation

  Cattoni DI, Fiche JB, Le Gall A, Nollmann M, Methods Mol Biol, 2018

2017

• Single-cell absolute contact probability detection reveals chromosomes are organized by multiple low-frequency yet specific interactions

  Cattoni DI, Gizzi AMC, Georgieva M, Di Stefano M, Valeri A, Chamousset D, Houbron C, Dejardin S, Fiche JB, Gonzalez I, Chang JM, Sexton T, Marti-Renom MA, Bantignies F, Cavalli G, Nollmann M, Nat Commun, 2017

• Imaging of Bacterial Chromosome Organization by 3D Super-Resolution Microscopy

  Le Gall A, Cattoni DI, Nollmann M, Methods Mol Biol, 2017

2016

• Bacterial partition complexes segregate within the volume of the nucleoid

  Le Gall A, Cattoni DI, Guilhas B, Mathieu-Demaziere C, Oudjedi L, Fiche JB, Rech J, Abrahamsson S, Murray H, Bouet JY, Nollmann M, Nat Commun, 2016

• Nanometer resolved single-molecule colocalization of nuclear factors by two-color super resolution microscopy imaging

  Georgieva M, Cattoni DI, Fiche JB, Mutin T, Chamousset D, Nollmann M, Methods, 2016

2015

• Cooperativity in Binding Processes: New Insights from Phenomenological Modeling

  Cattoni DI, Chara O, Kaufman SB, Gonzalez Flecha FL, PLoS ONE, 2015

• Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging

  Marbouty M, Le Gall A, Cattoni DI, Cournac A, Koh A, Fiche JB, Mozziconacci J, Murray H, Koszul R, Nollmann M, Mol Cell, 2015

• Stochastic Self-Assembly of ParB Proteins Builds the Bacterial DNA Segregation Apparatus

  Sanchez A, Cattoni DI, Walter JC, Rech J, Parmeggiani A, Nollmann M, Bouet JY, Cell Syst, 2015

• The fluorescence properties and binding mechanism of SYTOX green, a bright, low photo-damage DNA intercalating agent

  Thakur S, Cattoni DI, Nollmann M, Eur Biophys J, 2015

• A matter of scale: how emerging technologies are redefining our view of chromosome architecture

  Cattoni DI, Valeri A, Le Gall A, Nollmann M, Trends Genet, 2015

2014

• Kinetics of bioaccumulation of heavy metals in Odontesthes bonariensis is explained by a single and common mechanism

  Blanco MV, Cattoni DI, Carriquiriborde P, Grigera JR, Chara O, Ecological Modelling, 2014

• Chromosome organization: original condensins

  Cattoni DI, Le Gall A, Nollmann M, Curr Biol, 2014

2013

• Mechanisms of interaction between Candida albicans and Streptococcus mutans: an experimental and mathematical modelling study

  Brusca MI, Irastorza RM, Cattoni DI, Ozu M, Chara O, Acta Odontol Scand, 2013

• SpoIIIE mechanism of directional translocation involves target search coupled to sequence-dependent motor stimulation

  Cattoni DI, Chara O, Godefroy C, Margeat E, Trigueros S, Milhiet PE, Nollmann M, EMBO Rep, 2013

• Super-resolution imaging of bacteria in a microfluidics device

  Cattoni DI, Fiche JB, Valeri A, Mignot T, Nollmann M, PLoS ONE, 2013

• Structure and DNA-binding properties of the Bacillus subtilis SpoIIIE DNA translocase revealed by single-molecule and electron microscopies

  Cattoni DI, Thakur S, Godefroy C, Le Gall A, Lai-Kee-Him J, Milhiet PE, Bron P, Nollmann M, Nucleic Acids Res, 2013

• Recruitment, assembly, and molecular architecture of the SpoIIIE DNA pump revealed by superresolution microscopy

  Fiche JB, Cattoni DI, Diekmann N, Langerak JM, Clerte C, Royer CA, Margeat E, Doan T, Nollmann M, PLoS Biol, 2013

• The RYMV-encoded viral suppressor of RNA silencing P1 is a zinc-binding protein with redox-dependent flexibility

  Gillet FX, Cattoni DI, Petiot-Becard S, Delalande F, Poignavent V, Brizard JP, Bessin Y, Dorsselaer AV, Declerck N, Sanglier-Cianferani S, Brugidou C, Vignols F, J Mol Biol, 2013

2012

• Single-molecule super-resolution imaging in bacteria.

  Cattoni DI, Fiche JB, Nollmann M, Curr. Opin. Microbiol., 2012

• A two-stage model for lipid modulation of the activity of integral membrane proteins

  Dodes Traian MM, Cattoni DI, Levi V, Gonzalez Flecha FL, PLoS One, 2012

2011

• Effect of intestinal pressure on fistula closure during vacuum assisted treatment: a computational approach

  Cattoni DI, Ravazzola C, Tungler V, Wainstein DE, Chara O, Int J Surg, 2011

2009

• Kinetics and thermodynamics of the interaction of 1-anilino-naphthalene-8-sulfonate with proteins

  Cattoni DI, Kaufman SB, Gonzalez Flecha FL, Biochim Biophys Acta, 2009

2008

• Vacuum effects over the closing of enterocutaneous fistulae: a mathematical modeling approach

  Cattoni DI, Chara O, Bull Math Biol, 2008

• Thermal stability of CopA, a polytopic membrane protein from the hyperthermophile Archaeoglobus fulgidus

  Cattoni DI, Gonzalez Flecha FL, Arguello JM, Arch Biochem Biophys, 2008